Package: MetAlyzer
Type: Package
Title: Read and Analyze 'MetIDQ™' Software Output Files
Version: 1.2.0
Authors@R: c(
    person(given = "Qian-Wu",
           family = "Liao",
           role = c("aut")),
     person(given = "Luis",
           family = "Herfurth",
           role = c("aut"),
           comment = c(ORCID = "0009-0000-9933-3056")),       
    person(given = "Christina", 
           family = "Schmidt",
           role = c("aut"),
           comment = c(ORCID = "0000-0002-3867-0881")),
    person(given = "Nils",
           family = "Mechtel",
           role = c("aut"),
           comment = c(ORCID = "0000-0002-1278-7125")),
    person(given = "Hagen",
           family = "Gegner",
           role = c("aut")),
    person(given = "Alice",
           family = "Limonciel",
           role = c("aut")),       
    person(given = "Julio", 
           family = "Saez-Rodriguez", 
           role = "aut",
           comment = c(ORCID = "0000-0002-8552-8976")),
    person(given = "R\u00FCdiger",
           family = "Hell",
           role = c("aut")),
    person(given = "Junyan",
           family = "Lu",
           email = "junyan.lu@uni-heidelberg.de",
           role = c("aut", "cre")),
    person(given = "Gernot",
           family = "Poschet",
           role = c("aut"))
           )
Maintainer: Junyan Lu <junyan.lu@uni-heidelberg.de>
Depends: R (>= 4.0.0)
biocViews:
Imports: SummarizedExperiment, openxlsx, stringr, dplyr, cowplot,
        tidyr, ggplot2, ggrepel, utils, rlang, data.table, S4Vectors,
        magrittr, viridis, viridisLite, gridExtra, plotly, shiny,
        tibble, limma
Suggests: bslib, devtools, DT, ggpubr, htmlwidgets, kableExtra, knitr,
        remotes, rmarkdown, shinyBS, shinycssloaders, shinyWidgets,
        svglite, writexl
Description: The 'MetAlyzer' S4 object provides methods to read and
        reformat metabolomics data for convenient data handling,
        statistics and downstream analysis. The resulting format
        corresponds to input data of the Shiny app 'MetaboExtract'
        (<https://www.metaboextract.shiny.dkfz.de/MetaboExtract/>).
License: GPL-3
Encoding: UTF-8
Language: en-US
RoxygenNote: 7.3.3
VignetteBuilder: knitr
URL: https://github.com/nilsmechtel/MetAlyzer
BugReports: https://github.com/nilsmechtel/MetAlyzer/issues
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev libssl-dev
        zlib1g-dev
Repository: https://lu-group-ukhd.r-universe.dev
Date/Publication: 2026-04-27 08:43:43 UTC
RemoteUrl: https://github.com/lu-group-ukhd/metalyzer
RemoteRef: HEAD
RemoteSha: 793743572dd95ee6e460747c42a6e240e91efb4d
NeedsCompilation: no
Packaged: 2026-09-21 10:18:09 UTC; root
Author: Qian-Wu Liao [aut],
  Luis Herfurth [aut] (ORCID: <https://orcid.org/0009-0000-9933-3056>),
  Christina Schmidt [aut] (ORCID:
    <https://orcid.org/0000-0002-3867-0881>),
  Nils Mechtel [aut] (ORCID: <https://orcid.org/0000-0002-1278-7125>),
  Hagen Gegner [aut],
  Alice Limonciel [aut],
  Julio Saez-Rodriguez [aut] (ORCID:
    <https://orcid.org/0000-0002-8552-8976>),
  Rüdiger Hell [aut],
  Junyan Lu [aut, cre],
  Gernot Poschet [aut]